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ontresearch/wf-human-variation-sv:mr769_shab1f5cba6943c3dd1b264c2330fa6f7702a806433

Manifest digest

sha256:c363c5a9b53750784ff8ff9a1880afbaa3aff8f598217b99fb44e87c75b7148e

OS/ARCH

linux/amd64

Compressed size

388.97 MB

Last pushed

about 1 month by epi2melabs

Type

Image

Manifest digest

sha256:c363c5a9b53750784ff8ff9a1880afbaa3aff8f598217b99fb44e87c75b7148e

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=24.040 B
5ADD file ... in / 29.18 MB
6CMD ["/bin/bash"]0 B
7ENV DEBIAN_FRONTEND=noninteractive0 B
8LABEL maintainer=Oxford Nanopore Technologies0 B
9ARG WF_USER=epi2meuser0 B
10ARG WF_UID=10000 B
11ARG WF_GID=1000 B
12ARG ARCH=linux-640 B
13ARG MICROMAMBA_VERSION=1.5.120 B
14SHELL [/bin/bash -o pipefail -c]0 B
15RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1002.4 MB
16ENV SHELL=/bin/bash WF_USER=epi2meuser WF_UID=1000 WF_GID=1000 B
17ENV CW_ROOT=/opt/custflow0 B
18ENV HOME=/opt/custflow/epi2meuser0 B
19ENV CONDA_DIR=/opt/custflow/epi2meuser/conda0 B
20ENV PATH=/opt/custflow/epi2meuser/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
21COPY fix-permissions /usr/local/bin/fix-permissions # buildkit670 B
22RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=100663 B
23COPY entrypoint.sh /usr/local/bin/entrypoint.sh # buildkit358 B
24RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=100358 B
25ENTRYPOINT ["/usr/local/bin/entrypoint.sh"]0 B
26RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1001.3 KB
27RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1005.24 KB
28USER 10000 B
29WORKDIR /opt/custflow/epi2meuser32 B
30RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1005.91 MB
31ENV MAMBA_EXE=/opt/custflow/epi2meuser/bin/micromamba0 B
32ENV MAMBA_ROOT_PREFIX=/opt/custflow/epi2meuser/conda0 B
33USER 10000 B
34WORKDIR /opt/custflow/epi2meuser32 B
35ARG ENVFILE=environment.yaml0 B
36ARG ROOT_INIT_SCRIPT=root_init_script.sh0 B
37ARG BEFORE_SCRIPT=before_script.sh0 B
38ARG POST_INSTALL_SCRIPT=post_install_script.sh0 B
39ARG AFTER_SCRIPT=after_script.sh0 B
40ARG BIN_DIR=bin0 B
41ENV WFSV_EVAL_DATA_PATH=/cwg/data/wf_human_sv_benchmark/NIST_SVs_Integration_v0.60 B
42ENV WFSV_TRBED_PATH=/cwg/data/wf_human_sv_trbed0 B
43USER 00 B
44COPY root_init_script.sh /opt/custflow/epi2meuser/ # buildkit659 B
45COPY bin/* /usr/local/bin/ # buildkit751 B
46COPY whalefish_info /usr/share/whalefish/info # buildkit253 B
47RUN |6 ENVFILE=environment.yaml ROOT_INIT_SCRIPT=root_init_script.sh BEFORE_SCRIPT=before_script.sh112.62 MB
48USER 00 B
49COPY before_script.sh /opt/custflow/epi2meuser/ # buildkit244 B
50COPY post_install_script.sh /opt/custflow/epi2meuser/ # buildkit247 B
51COPY after_script.sh /opt/custflow/epi2meuser/ # buildkit1.07 KB
52COPY environment.yaml /opt/custflow/epi2meuser/environment.yaml # buildkit426 B
53RUN |6 ENVFILE=environment.yaml ROOT_INIT_SCRIPT=root_init_script.sh BEFORE_SCRIPT=before_script.sh238.85 MB
54USER 00 B
55WORKDIR /opt/custflow/epi2meuser32 B

Command

 ARG RELEASE