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ontresearch/wf-human-variation-sv:mr630_sha40bf58481d6fa82326ac7cb98b2d9caa141ca654

Manifest digest

sha256:12359a0b4323ff5a913f7ab6e38d8cd1c533db83e07e3824b431faa0206c51d4

OS/ARCH

linux/amd64

Compressed size

472.18 MB

Last pushed

about 1 year by epi2melabs

Type

Image

Manifest digest

sha256:12359a0b4323ff5a913f7ab6e38d8cd1c533db83e07e3824b431faa0206c51d4

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=20.040 B
5ADD file ... in / 26.24 MB
6CMD ["/bin/bash"]0 B
7ENV DEBIAN_FRONTEND=noninteractive0 B
8LABEL maintainer=Oxford Nanopore Technologies0 B
9ARG WF_USER=epi2meuser0 B
10ARG WF_UID=10000 B
11ARG WF_GID=1000 B
12ARG ARCH=linux-640 B
13ARG MICROMAMBA_VERSION=1.5.120 B
14SHELL [/bin/bash -o pipefail -c]0 B
15RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1003.48 MB
16ENV SHELL=/bin/bash WF_USER=epi2meuser WF_UID=1000 WF_GID=1000 B
17ENV CW_ROOT=/opt/custflow0 B
18ENV HOME=/opt/custflow/epi2meuser0 B
19ENV CONDA_DIR=/opt/custflow/epi2meuser/conda0 B
20ENV PATH=/opt/custflow/epi2meuser/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
21COPY fix-permissions /usr/local/bin/fix-permissions # buildkit665 B
22RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=100661 B
23COPY entrypoint.sh /usr/local/bin/entrypoint.sh # buildkit356 B
24RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=100356 B
25ENTRYPOINT ["/usr/local/bin/entrypoint.sh"]0 B
26RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1005.66 KB
27USER 10000 B
28WORKDIR /opt/custflow/epi2meuser32 B
29RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1005.91 MB
30ENV MAMBA_EXE=/opt/custflow/epi2meuser/bin/micromamba0 B
31ENV MAMBA_ROOT_PREFIX=/opt/custflow/epi2meuser/conda0 B
32USER 10000 B
33WORKDIR /opt/custflow/epi2meuser32 B
34ARG ENVFILE=environment.yaml0 B
35ARG ROOT_INIT_SCRIPT=root_init_script.sh0 B
36ARG BEFORE_SCRIPT=before_script.sh0 B
37ARG POST_INSTALL_SCRIPT=post_install_script.sh0 B
38ARG AFTER_SCRIPT=after_script.sh0 B
39ARG BIN_DIR=bin0 B
40ENV WFSV_EVAL_DATA_PATH=/cwg/data/wf_human_sv_benchmark/NIST_SVs_Integration_v0.60 B
41ENV WFSV_TRBED_PATH=/cwg/data/wf_human_sv_trbed0 B
42USER 00 B
43COPY root_init_script.sh /opt/custflow/epi2meuser/ # buildkit660 B
44COPY bin/* /usr/local/bin/ # buildkit749 B
45COPY whalefish_info /usr/share/whalefish/info # buildkit252 B
46RUN |6 ENVFILE=environment.yaml ROOT_INIT_SCRIPT=root_init_script.sh BEFORE_SCRIPT=before_script.sh115.39 MB
47USER 00 B
48COPY before_script.sh /opt/custflow/epi2meuser/ # buildkit246 B
49COPY post_install_script.sh /opt/custflow/epi2meuser/ # buildkit250 B
50COPY after_script.sh /opt/custflow/epi2meuser/ # buildkit5.13 KB
51COPY environment.yaml /opt/custflow/epi2meuser/environment.yaml # buildkit498 B
52RUN |6 ENVFILE=environment.yaml ROOT_INIT_SCRIPT=root_init_script.sh BEFORE_SCRIPT=before_script.sh321.15 MB
53USER 00 B
54WORKDIR /opt/custflow/epi2meuser32 B

Command

 ARG RELEASE