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ontresearch/resfinder:mr683_shaf79dc1736752c2a0801a5a608ac6c410aac0c247

Manifest digest

sha256:c952ca212b50728c6556f019fae35fb95d0cf87271df0d177df4329a4ecc91ae

OS/ARCH

linux/amd64

Compressed size

438.49 MB

Last pushed

12 months by epi2melabs

Type

Image

Manifest digest

sha256:c952ca212b50728c6556f019fae35fb95d0cf87271df0d177df4329a4ecc91ae

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=24.040 B
5ADD file ... in / 28.35 MB
6CMD ["/bin/bash"]0 B
7ENV DEBIAN_FRONTEND=noninteractive0 B
8LABEL maintainer=Oxford Nanopore Technologies0 B
9ARG WF_USER=epi2meuser0 B
10ARG WF_UID=10000 B
11ARG WF_GID=1000 B
12ARG ARCH=linux-640 B
13ARG MICROMAMBA_VERSION=1.5.120 B
14SHELL [/bin/bash -o pipefail -c]0 B
15RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1002.4 MB
16ENV SHELL=/bin/bash WF_USER=epi2meuser WF_UID=1000 WF_GID=1000 B
17ENV CW_ROOT=/opt/custflow0 B
18ENV HOME=/opt/custflow/epi2meuser0 B
19ENV CONDA_DIR=/opt/custflow/epi2meuser/conda0 B
20ENV PATH=/opt/custflow/epi2meuser/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
21COPY fix-permissions /usr/local/bin/fix-permissions # buildkit670 B
22RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=100663 B
23COPY entrypoint.sh /usr/local/bin/entrypoint.sh # buildkit358 B
24RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=100358 B
25ENTRYPOINT ["/usr/local/bin/entrypoint.sh"]0 B
26RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1001.3 KB
27RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1005.24 KB
28USER 10000 B
29WORKDIR /opt/custflow/epi2meuser32 B
30RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1005.91 MB
31ENV MAMBA_EXE=/opt/custflow/epi2meuser/bin/micromamba0 B
32ENV MAMBA_ROOT_PREFIX=/opt/custflow/epi2meuser/conda0 B
33USER 10000 B
34WORKDIR /opt/custflow/epi2meuser32 B
35ARG ENVFILE=environment.yaml0 B
36ARG ROOT_INIT_SCRIPT=root_init_script.sh0 B
37ARG BEFORE_SCRIPT=before_script.sh0 B
38ARG POST_INSTALL_SCRIPT=post_install_script.sh0 B
39ARG AFTER_SCRIPT=after_script.sh0 B
40ARG BIN_DIR=bin0 B
41ENV RESFINDER_DB=/databases0 B
42ENV CGE_RESFINDER_RESGENE_DB=/databases/resfinder_db0 B
43ENV CGE_RESFINDER_RESPOINT_DB=/databases/pointfinder_db0 B
44ENV CGE_DISINFINDER_DB=/databases/disinfinder_db0 B
45USER 00 B
46COPY root_init_script.sh /opt/custflow/epi2meuser/ # buildkit243 B
47COPY bin/* /usr/local/bin/ # buildkit15.19 KB
48COPY whalefish_info /usr/share/whalefish/info # buildkit249 B
49RUN |6 ENVFILE=environment.yaml ROOT_INIT_SCRIPT=root_init_script.sh BEFORE_SCRIPT=before_script.sh32 B
50USER 00 B
51COPY before_script.sh /opt/custflow/epi2meuser/ # buildkit242 B
52COPY post_install_script.sh /opt/custflow/epi2meuser/ # buildkit246 B
53COPY after_script.sh /opt/custflow/epi2meuser/ # buildkit1018 B
54COPY environment.yaml /opt/custflow/epi2meuser/environment.yaml # buildkit343 B
55RUN |6 ENVFILE=environment.yaml ROOT_INIT_SCRIPT=root_init_script.sh BEFORE_SCRIPT=before_script.sh401.8 MB
56USER 00 B
57WORKDIR /opt/custflow/epi2meuser32 B

Command

 ARG RELEASE