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ontresearch/bakta:shaecc3703c74bbab4d4d044d16179cc18c0fdab111

Multi-platform
Index digest

sha256:2f49a2b41847f4d2ba22048025b82c6a4ac1679673f2f96926c133d6ad6fdf26

OS/ARCH

Compressed size

2.14 GB

Last pushed

about 1 year by epi2melabs

Type

Image

Manifest digest

sha256:70ec0888a2661148b78ed274928162abead88138b2b951a48cea512a14c4c705

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=20.040 B
5ADD file ... in / 26.24 MB
6CMD ["/bin/bash"]0 B
7ENV DEBIAN_FRONTEND=noninteractive0 B
8LABEL maintainer=Oxford Nanopore Technologies0 B
9ARG WF_USER=epi2meuser0 B
10ARG WF_UID=10000 B
11ARG WF_GID=1000 B
12ARG ARCH=linux-640 B
13ARG MICROMAMBA_VERSION=1.5.120 B
14SHELL [/bin/bash -o pipefail -c]0 B
15RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1003.48 MB
16ENV SHELL=/bin/bash WF_USER=epi2meuser WF_UID=1000 WF_GID=1000 B
17ENV CW_ROOT=/opt/custflow0 B
18ENV HOME=/opt/custflow/epi2meuser0 B
19ENV CONDA_DIR=/opt/custflow/epi2meuser/conda0 B
20ENV PATH=/opt/custflow/epi2meuser/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
21COPY fix-permissions /usr/local/bin/fix-permissions # buildkit665 B
22RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=100661 B
23COPY entrypoint.sh /usr/local/bin/entrypoint.sh # buildkit356 B
24RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=100356 B
25ENTRYPOINT ["/usr/local/bin/entrypoint.sh"]0 B
26RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1005.66 KB
27USER 10000 B
28WORKDIR /opt/custflow/epi2meuser32 B
29RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1005.91 MB
30ENV MAMBA_EXE=/opt/custflow/epi2meuser/bin/micromamba0 B
31ENV MAMBA_ROOT_PREFIX=/opt/custflow/epi2meuser/conda0 B
32USER 10000 B
33WORKDIR /opt/custflow/epi2meuser32 B
34ARG ENVFILE=environment.yaml0 B
35ARG ROOT_INIT_SCRIPT=root_init_script.sh0 B
36ARG BEFORE_SCRIPT=before_script.sh0 B
37ARG POST_INSTALL_SCRIPT=post_install_script.sh0 B
38ARG AFTER_SCRIPT=after_script.sh0 B
39ARG BIN_DIR=bin0 B
40ENV BAKTA_DB=/bakta_databases0 B
41ENV BAKTA_DB_LIGHT=/bakta_databases/db-light0 B
42ENV BAKTA_DB_FULL=/bakta_databases/db0 B
43ENV BAKTA_DB_LIGHT_AMRFINDER=/bakta_databases/db-light/amrfinderplus-db0 B
44ENV BAKTA_DB_FULL_AMRFINDER=/bakta_databases/db/amrfinderplus-db0 B
45USER 00 B
46COPY root_init_script.sh /opt/custflow/epi2meuser/ # buildkit247 B
47COPY bin/* /usr/local/bin/ # buildkit748 B
48COPY whalefish_info /usr/share/whalefish/info # buildkit253 B
49RUN |6 ENVFILE=environment.yaml ROOT_INIT_SCRIPT=root_init_script.sh BEFORE_SCRIPT=before_script.sh32 B
50USER 00 B
51COPY before_script.sh /opt/custflow/epi2meuser/ # buildkit245 B
52COPY post_install_script.sh /opt/custflow/epi2meuser/ # buildkit250 B
53COPY after_script.sh /opt/custflow/epi2meuser/ # buildkit368 B
54COPY environment.yaml /opt/custflow/epi2meuser/environment.yaml # buildkit347 B
55RUN |6 ENVFILE=environment.yaml ROOT_INIT_SCRIPT=root_init_script.sh BEFORE_SCRIPT=before_script.sh2.11 GB
56USER 00 B
57WORKDIR /opt/custflow/epi2meuser32 B

Command

 ARG RELEASE