nextstrain/ncov-ingest:branch-victorlin-update-transform-genbank

Index digest

sha256:19448286696efb6ea71cc9cd43e71e340961080b14beb85537a06d789d4fa446

OS/ARCH

linux/amd64

Compressed size

937.36 MB

Last pushed

6 months by nextstrainbot

Type

Image

Manifest digest

sha256:d70c2ce1376191b778bd6138232fe814d8572ed12b93cc3106ef167b5417fe1d

Image Layers

Image Layers

1# debian.sh --arch 'amd64' out/26.93 MB

2ENV PATH=/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

3ENV LANG=C.UTF-80 B

4RUN /bin/sh -c set -eux;3.35 MB

5ENV GPG_KEY=A035C8C19219BA821ECEA86B64E628F8D684696D0 B

6ENV PYTHON_VERSION=3.11.150 B

7ENV PYTHON_SHA256=272179ddd9a2e41a0fc8e42e33dfbdca0b3711aa5abf372d3f2d51543d09b6250 B

8RUN /bin/sh -c set -eux;15.2 MB

9RUN /bin/sh -c set -eux;250 B

10CMD ["python3"]0 B

11SHELL [/bin/bash -e -u -o0 B

12RUN /bin/bash -e -u -o88.15 MB

13RUN /bin/bash -e -u -o48.71 MB

14ARG TARGETPLATFORM=linux/amd640 B

15COPY bashrc /etc/bash.bashrc # buildkit372 B

16COPY /final/bin/ /usr/local/bin/ # buildkit69.64 MB

17COPY /final/share/ /usr/local/share/ # buildkit38.14 KB

18COPY /final/libexec/ /usr/local/libexec/ # buildkit15.51 MB

19ENV MAFFT_BINARIES=/usr/local/libexec0 B

20RUN |1 TARGETPLATFORM=linux/amd64 /bin/bash -e41.74 MB

21COPY /usr/local/lib/python3.11/site-packages/ /usr/local/lib/python3.11/site-packages/ # buildkit450.65 MB

22COPY /usr/local/libexec/awscli/ /usr/local/libexec/awscli/ # buildkit18.83 MB

23COPY /usr/local/bin/augur /usr/local/bin/aws /usr/local/bin/bio /usr/local/bin/envdir1.43 KB

24COPY /usr/lib/node_modules/ /usr/lib/node_modules/ # buildkit192 B

25RUN |1 TARGETPLATFORM=linux/amd64 /bin/bash -e179 B

26RUN |1 TARGETPLATFORM=linux/amd64 /bin/bash -e193 B

27RUN |1 TARGETPLATFORM=linux/amd64 /bin/bash -e1.08 KB

28COPY --chown=nextstrain:nextstrain /nextstrain /nextstrain #104.98 MB

29COPY --chown=nextstrain:nextstrain /nextstrain /nextstrain #7.27 MB

30COPY entrypoint entrypoint-aws-batch drop-privs create-envd2.25 KB

31RUN |1 TARGETPLATFORM=linux/amd64 /bin/bash -e32 B

32RUN |1 TARGETPLATFORM=linux/amd64 /bin/bash -e100 B

33ENV HOME=/nextstrain0 B

34USER nextstrain:nextstrain0 B

35ENV NEXTSTRAIN_HOME=/nextstrain0 B

36RUN |1 TARGETPLATFORM=linux/amd64 /bin/bash -e434.29 KB

37WORKDIR /nextstrain/build128 B

38RUN |1 TARGETPLATFORM=linux/amd64 /bin/bash -e32 B

39USER root0 B

40ENTRYPOINT ["/sbin/entrypoint"]0 B

41ARG GIT_REVISION=2d7dddef55d259922fee1916a4e5a28f2b8b46d00 B

42LABEL maintainer=Nextstrain team <[email protected]>0 B

43LABEL org.opencontainers.image.authors=Nextstrain team <[email protected]>0 B

44LABEL org.opencontainers.image.source=https://github.com/nextstrain/docker-base0 B

45LABEL org.opencontainers.image.revision=2d7dddef55d259922fee1916a4e5a28f2b8b46d00 B

46LABEL org.nextstrain.image.name=nextstrain/base0 B

47RUN /bin/bash -e -u -o17.94 MB

48COPY requirements.txt /nextstrain/ncov-ingest/ # buildkit243 B

49RUN /bin/bash -e -u -o28 MB

50ENV PATH=./bin:/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

51ARG GIT_REVISION=cd2afe40 B

52LABEL org.opencontainers.image.source=https://github.com/nextstrain/ncov-ingest0 B

53LABEL org.opencontainers.image.revision=cd2afe40 B

54LABEL org.nextstrain.image.name=nextstrain/ncov-ingest0 B

Command

# debian.sh --arch 'amd64' out/ 'bookworm' '@1771804800'