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encodedcc/hic-pipeline:PIPE-112-MseI-regex_661f6c66-9690-415b-aec3-da1364ef376f

Manifest digest

sha256:bb0a267c51748348462a698fe25f15e8bc3a57499aed4e691e89ab874747651f

OS/ARCH

linux/amd64

Compressed size

1.52 GB

Last pushed

almost 3 years by encoderobot

Type

Image

Manifest digest

sha256:bb0a267c51748348462a698fe25f15e8bc3a57499aed4e691e89ab874747651f

Image Layers

1ADD file ... in / 42.14 MB
2/bin/sh -c rm -rf /var/lib/apt/lists/*526 B
3/bin/sh -c set -xe &&850 B
4/bin/sh -c mkdir -p /run/systemd169 B
5CMD ["/bin/bash"]0 B
6LABEL maintainer=Paul Sud0 B
8ENV BWA_VERSION=0.7.170 B
9ENV PAIRIX_VERSION=0.3.60 B
10RUN /bin/sh -c apt-get update443.66 MB
11RUN /bin/sh -c echo 'alias1.54 KB
12RUN /bin/sh -c ln -s152 B
13RUN /bin/sh -c locale-gen en_US.UTF-8414.61 KB
14RUN /bin/sh -c sed -i243 B
15WORKDIR /opt/32 B
16RUN /bin/sh -c curl -OL2.58 MB
17RUN /bin/sh -c export SAMTOOLS_VERSION=1.142.58 MB
18RUN /bin/sh -c curl -OL158.58 KB
19RUN /bin/sh -c git clone8.68 MB
20RUN /bin/sh -c git clone6.26 MB
21RUN /bin/sh -c git clone101.23 MB
22RUN /bin/sh -c curl 31.22 MB
23RUN /bin/sh -c curl 31.74 MB
24RUN /bin/sh -c curl 31.28 MB
25RUN /bin/sh -c curl 22.33 MB
26RUN /bin/sh -c curl 21.98 MB
27RUN /bin/sh -c curl 740.35 MB
28RUN /bin/sh -c git clone121.74 KB
29RUN /bin/sh -c git clone68.92 MB
30RUN /bin/sh -c git clone10.04 KB
31ENV LC_ALL=C0 B
32ENV PATH=/opt:/opt/scripts:/opt/scripts/common:/opt/juicer/misc:/opt/gatk-4.2.2.0:/opt/hic2gatk:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
33RUN /bin/sh -c mkdir -p139 B
34COPY hic_pipeline hic-pipeline/hic_pipeline/ # buildkit3.71 KB
35ENV PATH=/opt/hic-pipeline/hic_pipeline:/opt:/opt/scripts:/opt/scripts/common:/opt/juicer/misc:/opt/gatk-4.2.2.0:/opt/hic2gatk:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

Command

ADD file:1f70668251e2e58cee0ff0c22ee805f8a269ac6f8934c07f7e89dca6cc1de3aa in /