bryce911/rqc-pipeline:20220726

Manifest digest

sha256:66b9a51980485bd50b22b8c495b556e5ff5fb0903d228b8447c0f67513ea44de

OS/ARCH

linux/amd64

Compressed size

1.59 GB

Last pushed

about 4 years by bryce911

Type

Image

Manifest digest

sha256:66b9a51980485bd50b22b8c495b556e5ff5fb0903d228b8447c0f67513ea44de

Image Layers

1ADD file ... in / 67.23 MB

2LABEL name=CentOS Base Image0 B

3CMD ["/bin/bash"]0 B

4MAINTAINER Bryce Foster <[email protected]>0 B

5ARG BBV=38.230 B

6ENV BBV=38.960 B

7ARG SAMV=1.150 B

8ENV SAMV=1.150 B

9ARG SAMBAMBAV=0.8.10 B

10ENV SAMBAMBAV=0.8.10 B

11/bin/sh -c yum install -y41.88 MB

12/bin/sh -c wget -nv --no-check-certificate10.65 MB

13ADD file ... in . 154.67 MB

14/bin/sh -c rpm -Uvh jdk-17_linux-x64_bin.rpm179.18 MB

15/bin/sh -c wget -nv --no-check-certificate9.74 MB

16/bin/sh -c wget -nv https://github.com/biod/sambamba/releases/download/v0.8.1/sambamba-0.8.1-linux-amd64-static.gz1.66 MB

17ENV BBTOOLS_VERSION=38.960 B

18ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/local/bin/:/bbmap/0 B

19ENV SAMTOOLS_VERSION=1.150 B

20/bin/sh -c stats.sh in=bbmap/resources/phix174_ill.ref.fa.gz &&160 B

21MAINTAINER Bryce Foster <[email protected]>0 B

22ARG BLASTV=2.13.00 B

23|1 BLASTV=2.13.0 /bin/sh -c yum60.27 MB

24ADD dir:d0654034c364f53b0e167113242276baecce98b0f186dfdaeefb65915b064dfa in /jgi-rqc-pipeline/ 44.75 MB

25ADD file ... in Miniconda3.sh 84.61 MB

26|1 BLASTV=2.13.0 /bin/sh -c /bin/bash739.73 MB

27|1 BLASTV=2.13.0 /bin/sh -c wget230.46 MB

28

ENV PATH=/rqc-38/bin:/ncbi-blast-2.13.0+/bin:/minimap2://usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/local/bin/:/bbmap/

0 B

29ENV RQC_ENV=docker0 B

Command

ADD file:d22a9c627d1d1f32a8db8ba273b7eed2b2b8d0c4e812063082a0c2ff0548525a in /