broadinstitute/dig-loam:saige_v1.1.9

Manifest digest

sha256:ef196d2c810d4d9114bc02b9944cc73430635546735032c3348f18cd0541d289

OS/ARCH

linux/amd64

Compressed size

898.76 MB

Last pushed

over 3 years by ryankbroad

Type

Image

Manifest digest

sha256:ef196d2c810d4d9114bc02b9944cc73430635546735032c3348f18cd0541d289

Image Layers

1ADD file ... in / 27.25 MB

2CMD ["bash"]0 B

3LABEL [email protected]0 B

4ENV LC_ALL=C.UTF-80 B

5ENV LANG=C.UTF-80 B

6/bin/sh -c apt-get update &&453.96 MB

7/bin/sh -c pip3 install cget439.91 KB

8WORKDIR /app126 B

9COPY dir:3710918df2bffff70eb2f14710f52f965763000b73c7b93fcf6ec68b3748a82f in . 272.07 MB

10/bin/sh -c echo "ok"0 B

11/bin/sh -c Rscript extdata/install_packages.R81.72 MB

12ENV OMP_NUM_THREADS=10 B

13/bin/sh -c R CMD INSTALL49.04 MB

14/bin/sh -c mv extdata/step1_fitNULLGLMM.R extdata/step2_SPAtests.R8.55 KB

15/bin/sh -c chmod a+x /usr/local/bin/step1_fitNULLGLMM.R3.6 KB

16/bin/sh -c chmod a+x /usr/local/bin/step2_SPAtests.R5.06 KB

17/bin/sh -c chmod a+x /usr/local/bin/step3_LDmat.R2.63 KB

18/bin/sh -c chmod a+x /usr/local/bin/createSparseGRM.R1.2 KB

19/bin/sh -c createSparseGRM.R --help92 B

20/bin/sh -c step1_fitNULLGLMM.R --help92 B

21/bin/sh -c step2_SPAtests.R --help92 B

22/bin/sh -c step3_LDmat.R --help92 B

23/bin/sh -c apt-get update13.69 MB

24/bin/sh -c apt-get install time583.28 KB

25RUN /bin/sh -c ln -s248 B

Command

ADD file:00dae10e79b05c4e1a3db053a1f85a4f38a39fe85cbbd88d74201a01a7dd59b5 in /